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Library » keywords: Sequence Analysis, DNA
Items 1 - 10 of 17.
DNA copy number, including telomeres and mitochondria, assayed using next-generation sequencing.
Castle JC, Biery M, Bouzek H, Xie T, Chen R, Misura K, Jackson S, Armour CD, Johnson JM, Rohl C...
BMC Genomics (2010) 11: 244.
Category: genomics, mitochondria, mitochondrial DNA, telomere ¤ Added: Sep 30th, 2010 ¤ Rating: ◊◊
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The tedious task of finding homologous noncoding RNA genes.
Menzel P, Gorodkin J, Stadler PF
RNA (2009) 15: 2075-82.
Category: bioinformatics, genomics, RNA structure ¤ Added: Jan 11th, 2010 ¤ Rating: ◊◊
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Comprehensive mapping of long-range interactions reveals folding principles of the human genome.
Lieberman-Aiden E, van Berkum NL, Williams L, Imakaev M, Ragoczy T, Telling A, Amit I, Lajoie B...
Science (2009) 326: 289-93.
Category: 3C, chromatin structure, eukaryotes, nucleus ¤ Added: Jan 11th, 2010 ¤ Rating: ◊◊
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Genomics. Genome project standards in a new era of sequencing.
Chain PS, Grafham DV, Fulton RS, Fitzgerald MG, Hostetler J, Muzny D, Ali J, Birren B, Bruce DC...
Science (2009) 326: 236-7.
Category: genomics, science policy ¤ Added: Oct 26th, 2009 ¤ Rating: ◊◊
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Gene and genome trees conflict at many levels.
Haggerty LS, Martin FJ, Fitzpatrick DA, McInerney JO
Philos Trans R Soc Lond B Biol Sci (2009) 364: 2209-19.
Category: bacteria, bioinformatics, HGT ¤ Added: Oct 26th, 2009 ¤ Rating: ◊◊
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Genome sequence of the lager brewing yeast, an interspecies hybrid.
Nakao Y, Kanamori T, Itoh T, Kodama Y, Rainieri S, Nakamura N, Shimonaga T, Hattori M, Ashikari...
DNA Res (2009) 16: 115-29.
Category: genomics, yeast-misc ¤ Added: Sep 30th, 2009 ¤ Rating: ◊◊
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REPuter: the manifold applications of repeat analysis on a genomic scale.
Kurtz S, Choudhuri JV, Ohlebusch E, Schleiermacher C, Stoye J, Giegerich R
Nucleic Acids Res (2001) 29: 4633-42.
Category: bioinformatics, genomics ¤ Added: Sep 30th, 2009 ¤ Rating: ◊◊
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GeneSyn: a tool for detecting conserved gene order across genomes.
Pavesi G, Mauri G, Iannelli F, Gissi C, Pesole G
Bioinformatics (2004) 20: 1472-1474.
Category: bioinformatics, mitochondrial DNA ¤ Added: Jul 16th, 2009 ¤ Rating: ◊◊
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Patellamide A and C biosynthesis by a microcin-like pathway in Prochloron didemni, the cyanobacterial symbiont of Lissoclinum patella.
Schmidt EW, Nelson JT, Rasko DA, Sudek S, Eisen JA, Haygood MG, Ravel J
Proc Natl Acad Sci U S A (2005) 102: 7315-7320.
Category: endosymbionts ¤ Added: Jul 16th, 2009 ¤ Rating: ◊◊
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A feature-based approach to modeling protein-DNA interactions.
Sharon E, Lubliner S, Segal E
PLoS Comput Biol (2008) 4: e1000154.
Category: DNA-ligand interactions ¤ Added: Jul 15th, 2009 ¤ Rating: ◊◊
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